bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1180_orf1 Length=116 Score E Sequences producing significant alignments: (Bits) Value 379731.PST_2194 95.9 3e-19 > 379731.PST_2194 Length=540 Score = 95.9 bits (237), Expect = 3e-19, Method: Composition-based stats. Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 2/95 (2%) Query 1 VQSYEEMRLKLLNGGHSCVAYVATLLGYRFVDEALRDVRVSGFLRSFMDE-VTPCLEDLK 59 V YEEM++KLLNG H + Y+ L GYRFV E + D + ++R +MDE VTP L + Sbjct 337 VSPYEEMKIKLLNGSHLALTYLGFLRGYRFVHETMADPLFAEYIRRYMDEDVTPQLAPVP 396 Query 60 -VDVERYKERIVERFGNAFVKDELQRVAQDGSSKF 93 +D+ RYK+ ++ERF N + D+L+RV DGSSKF Sbjct 397 GIDLARYKQTLIERFSNCAIADQLERVCSDGSSKF 431 Lambda K H 0.322 0.138 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22619469984 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40