bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1177_orf1 Length=161 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd6_4410 212 2e-54 > 5807.cgd6_4410 Length=1084 Score = 212 bits (540), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 105/161 (65%), Positives = 130/161 (80%), Gaps = 3/161 (1%) Query 1 LLTRGQQIKVTSQLLRKCRQLHYLVPSVKRVGGDRDDKYEGATVLEPLKGFYNMPISTLD 60 LL+RGQQIKVTSQ+LRKC+ ++L+P+VK D D++YEGATVLEPLKGFY PISTLD Sbjct 531 LLSRGQQIKVTSQILRKCKSTNFLMPTVKN-QSDGDNQYEGATVLEPLKGFYKDPISTLD 589 Query 61 FASLYPSIMMAHNICYSTLVKGTDVQTLQQDTLTHTTSSPRHTFVKASVRRGVLPMIVEE 120 FASLYPSIM+AHNICYSTL+ +++ + +D TS H+FV +SVR+G+LP+IVEE Sbjct 590 FASLYPSIMIAHNICYSTLIPPLNLKNVPED--LRKTSPTGHSFVLSSVRKGILPLIVEE 647 Query 121 LIAARKVAKAEMSKAEDKFMKSVLNGRQLALKITANSVYGY 161 LIAARK AK EM +A D + S+LNGRQLALK +ANSVYGY Sbjct 648 LIAARKKAKKEMEEATDPTLISILNGRQLALKTSANSVYGY 688 Lambda K H 0.320 0.133 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 26764363279 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40