bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1167_orf2 Length=275 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0143 184 2e-45 > 5833.PF14_0143 Length=2770 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 98/242 (40%), Positives = 144/242 (59%), Gaps = 21/242 (8%) Query 48 PVILDWGLVKEFDSKGQTAFSKLVYSVASMDVMGLMEAFEHMGFMFKEGKGAVVDPEIYM 107 PVI+DWGL+K+ DS + AF KLVY+++ M+V+ ++EAFE MGF FKE DPEIY+ Sbjct 664 PVIIDWGLIKQLDSVMKFAFCKLVYNISCMNVLNIIEAFEDMGFCFKED--FTYDPEIYI 721 Query 108 EALRVAF-----------RQGEVEKNETEALHKAAGETVQAAVKAGITRKKIQEANPLED 156 E L+ F +GE E + +A + I +K + + NP+ D Sbjct 722 ENLKTYFLSKLEESKSKGNEGEKEFGSANTIDEANKSNKNMEILKNIEKKDVMDKNPISD 781 Query 157 WPKDIIFFVRVASLLHGLCVQLKVHIPFLQIMVRRAQECLFNRYQPPSPLIYTHFLGGRG 216 PKDIIFF+RVASLLHGLC QL V I +L I RRA+E L Y P + I+T + Sbjct 782 VPKDIIFFMRVASLLHGLCTQLNVKINYLNIFSRRAKEALEKIYIPINNSIHTIPID--- 838 Query 217 AAKCS---LHQRLNRLLQSLVERKLVLGCQVAVCYEGEMIVDAAIGQMGPVDTRPVTPDS 273 KC + +R+++ +++L E+K +LGCQVA+ ++ +++V+ +G D RP+T S Sbjct 839 --KCPNTFVEKRIHQFIKTLYEKKKILGCQVAIIHKKKLVVNTCVGITSTTDKRPITKHS 896 Query 274 LF 275 LF Sbjct 897 LF 898 Lambda K H 0.324 0.140 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 89781565905 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40