bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1166_orf3 Length=335 Score E Sequences producing significant alignments: (Bits) Value 7719.ENSCINP00000005906 182 1e-44 > 7719.ENSCINP00000005906 Length=1057 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 110/259 (42%), Positives = 145/259 (55%), Gaps = 20/259 (7%) Query 78 CSPNATCDPLVG--TCQCKPGFRGDGVSCEPFNPCEETPSPCDSNAICTPDGNDAKCQCK 135 C NATC G TC C GF GDGVSC + C CD+NA CT C C Sbjct 52 CYTNATCTNTTGSFTCACNTGFTGDGVSCRDIDECTLGTHNCDTNATCTNTTGSFTCTCN 111 Query 136 TGWDADAAAGSSSQPCVEVDECAANTHQCPAHSTCSNTQGSYDCQCLSGYQKGEDGECHD 195 TG+ D + C ++DEC TH C ++TC+NT GS+ C C +G+ G+ C D Sbjct 112 TGFTGDGVS------CTDIDECTLGTHNCDTNATCTNTTGSFTCTCNTGF-SGDGVSCTD 164 Query 196 IDECKTGEHNCPAHSTCSNTQGGFECRCDAGYRGNATTDSPCVNIDECA-NPDACSANAI 254 IDEC G HNC ++TC+NT G F C C+ G+ G+ C +IDECA C NA Sbjct 165 IDECALGTHNCHENATCTNTTGSFTCTCNTGFTGDGV---SCTDIDECALGTHNCDTNAT 221 Query 255 CTDTDGSYSCSCPEGYSGEGSHDSPCSKIDFCADPSLNTCGAHSTCVNTLTSFKCVCELG 314 CT+T GS++C+C G++G+G C+ ID CA + N C A++TC NT SF C C G Sbjct 222 CTNTTGSFTCTCNTGFTGDG---VSCTDIDECALGTHN-CHANATCTNTTGSFTCTCNTG 277 Query 315 YEGDGTRESPCVDVDECSV 333 + GDG C D+DEC++ Sbjct 278 FTGDGV---SCTDIDECAL 293 Lambda K H 0.316 0.132 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 123702018651 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40