bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1101_orf2
Length=239
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT5G04430.2 63.5 5e-09
> 3702.AT5G04430.2
Length=334
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query 102 GAPTANSATAAAATAATAAAAAADTCYCKLLVSNHLAGIIIGQAGSEIRTLKTLTGAKIV 161
G+P + + ++ A +A + + LVSN AG +IG+ GS I + +GA+I
Sbjct 10 GSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQ 69
Query 162 LSPHGMYFPGTSDRVAAIEGAETAVLHVVDWLIDKLQTA--AEDAANPLQQQQQ 213
LS + +FPGT+DR+ I G+ V++ ++ ++DKL + AED N ++ +++
Sbjct 70 LSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAED-GNEVEPRRR 122
Lambda K H
0.309 0.119 0.324
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 69865650655
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40