bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1098_orf2 Length=223 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd6_1950 322 4e-87 > 5807.cgd6_1950 Length=804 Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 142/221 (64%), Positives = 181/221 (81%), Gaps = 0/221 (0%) Query 3 RRQMLWFAILQAQIETGTPYMLYKDACNRKSNHQHLGTLRSSNLCCEVVQYTSPEEVAVC 62 + Q LWF ILQAQIETGTP++ YKDA N KSN ++LGT+ SSNLC E+++YTS +EVAVC Sbjct 384 KAQKLWFLILQAQIETGTPFICYKDAANSKSNQKNLGTIVSSNLCTEIIEYTSTDEVAVC 443 Query 63 NLASVSLPRFVDAEKKTFDYDKLKDVIKVMTRNLNNIIDRNYYPIPEARRSNLRHRPIGL 122 NLAS+ LP+FVD KTFD+DKLK+V KV+TRNLN +ID YY + E ++SNLRHRP+G+ Sbjct 444 NLASIGLPKFVDKNNKTFDFDKLKEVTKVITRNLNKLIDVGYYSLKECKKSNLRHRPLGI 503 Query 123 GVQGLADAFLLLRLPFDSPAARDINKNIFECIYFAACEASMELAAIHGTYETYEGSPMSK 182 G+QGLAD F++LR+P++S A+ +NK IFE IY+AA +AS ELA +G YETY GSP SK Sbjct 504 GIQGLADCFMMLRMPYESEGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSPASK 563 Query 183 GVFQFDMWGVKPDSGLCDWQGLRQKVKKYGLRNSLLVSPMP 223 G+ QFDMWGV PDSGLCDW L+ ++ K+G+RNSLL+SPMP Sbjct 564 GILQFDMWGVTPDSGLCDWDLLKDRISKHGIRNSLLISPMP 604 Lambda K H 0.322 0.137 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 61001067300 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40