bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1091_orf2 Length=270 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_2620 303 3e-81 > 5807.cgd3_2620 Length=1902 Score = 303 bits (777), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 151/285 (52%), Positives = 195/285 (68%), Gaps = 16/285 (5%) Query 1 DRSLPHFSKFDYSPESRGFVEHSYLTGLLPQELFFHAMGGREGIIDTACKTSETGYIQRR 60 DRSLPHF K+DY PESRGFV +SYL+GL PQE+FFHAMGGREGIIDTACKTSETGYIQRR Sbjct 816 DRSLPHFLKYDYGPESRGFVSNSYLSGLTPQEVFFHAMGGREGIIDTACKTSETGYIQRR 875 Query 61 LMKAMEDVKVSYDRTVRNSAQEVLQFLYGEDGMSGEYVEDQVIELMQMDAEKIRRVYRHD 120 L+KAMED V YDRTVRNS +++QFLYGEDGM+GE++EDQVIEL+QM+A + YRH+ Sbjct 876 LIKAMEDCMVQYDRTVRNSNGDIIQFLYGEDGMAGEFIEDQVIELLQMEAAVFQHKYRHN 935 Query 121 LDQESYGKGWI-LNEELRTKLFVDFSAQQVLEDEYEAIKEDKLRLCKSIFPDGEVKQHIP 179 L+ +G W + L L D +Q +L EY+ + D+ +L K IFPDGE +QH+P Sbjct 936 LEHPRWGSSWAGVQPSLIKNLQFDLESQNILNSEYKQLVTDREQLGKDIFPDGETRQHLP 995 Query 180 INIMRLLEFAKAQFPPSVEQL---KKQDPVAIAKSVSELLNDKLIVVKQTCKA------- 229 INI R+++ A+ +FP V K PV I K V LL DKL++ K Sbjct 996 ININRIIQMAQQKFPQRVSDTSSSKDWGPVYIIKKVESLL-DKLLLWKNVGIINDEGNKS 1054 Query 230 ----DTISAEVQENATVFMKAHLRTVLNSRRLMEREQLGVKAVHW 270 D+I AEVQ+NAT + H+R+ L S++++E ++LG A W Sbjct 1055 NFVFDSIIAEVQKNATTLLGIHIRSSLASKKILEVDRLGPTAFEW 1099 Lambda K H 0.319 0.135 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 86768761680 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40