bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1078_orf1
Length=133
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF07_0059 68.6 5e-11
> 5833.PF07_0059
Length=322
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query 36 QEQHLMCNGSSSI------QQQQQHKSRVYVVGEKGLLEELRSNGIDAFGGPEEAYEAID 89
+ +H++C + ++ + K ++YV+GEKG+ +EL ++ +D GG + + I
Sbjct 105 KREHIICTAYAVTKYLYDKEEYRLRKKKIYVIGEKGICDELDASNLDWLGGSNDNDKKII 164
Query 90 FARDPAVYVQPEVNYVVVGLDRDFYYKKLQTAQLYINDMHAKFI 133
D + V + VVVG+D + Y K+Q AQL IN+++A+FI
Sbjct 165 LKDDLEIIVDKNIGAVVVGIDFNINYYKIQYAQLCINELNAEFI 208
Lambda K H
0.316 0.131 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22766716098
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40