bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1072_orf1 Length=199 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL0805w 115 9e-25 > 5833.PFL0805w Length=1073 Score = 115 bits (287), Expect = 9e-25, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 98/207 (47%), Gaps = 13/207 (6%) Query 1 GFAMCAPHERVLLGFALELNFLDENAIAARAGIKACAPGREKCVGLERPAKEGDDARIFV 60 G C +L+GF++ LNF +++ GI C P +E C G K D RIF Sbjct 825 GLLTCPIGTTILMGFSINLNFYKNKYLSSTNGITLCEPMKESCSG-NGFEKNYSDIRIFA 883 Query 61 LCGPEPVAGLEQVVVQSPL-KAVAVCPQGSMILTGFALSLTGGREGPKKTAFFPCRAGLP 119 LC +P + QVV Q K A CP +IL GFAL G K +PCR G Sbjct 884 LCTNKPFDFITQVVQQGEAPKISASCPGELVILFGFALMKGIGSSSANKIDIYPCRTGQN 943 Query 120 SCTA-LGLRGTQQNMVWIVCVDEATPGLQ------TVTNVGEVVTGVATKHAYTDGIVKA 172 SC A L +Q+M+++ CVD+ T GL+ N+G+V+ + +DG + Sbjct 944 SCEAVLQNHKFKQSMIYLACVDKTTNGLEYLQTYSKTKNLGDVI----SDKYKSDGYLNF 999 Query 173 SCPPNLGVALGFGLELHTRMPRVREKF 199 SCP N + GF LE HT R F Sbjct 1000 SCPQNNTLVFGFSLEFHTNFQATRNNF 1026 Lambda K H 0.322 0.139 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 47162034073 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40