bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1068_orf4 Length=466 Score E Sequences producing significant alignments: (Bits) Value 7165.AGAP008746-PA 176 1e-42 > 7165.AGAP008746-PA Length=341 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 102/287 (35%), Positives = 164/287 (57%), Gaps = 25/287 (8%) Query 48 LTGFFYMYGSKAIFHPDSHYIEEDPA----YIRGPAVAGLPFDDVYITTRDNVKLHGWLI 103 ++G Y ++HP E PA +I P++ GLP++ +++ TRD V LH + I Sbjct 50 ISGILYHAQDNLLYHP------ELPANSRIFIPVPSMHGLPYETLHLKTRDAVSLHAFWI 103 Query 104 KQP--EPKEAPTFVCFQGNYGYQGFRLAHAEELY-GLGANVFLMDYRGFGRSEGTPTVEG 160 + P + + PT V F GN G G RL +A Y L NV +++YRG+G S GTP+ +G Sbjct 104 RHPGDKGRYVPTIVYFHGNAGNMGHRLQNATGFYHTLQCNVLMVEYRGYGLSTGTPSEKG 163 Query 161 VYADADAALDYILSNQDVNNEDIFVLGHSLGGGVAVDLA--SRRGNQIKGLVIENTFTSL 218 +ADA + LD++ S D+++ I V G SLGG V++DLA + G ++ G+++ENTFTS+ Sbjct 164 FFADARSVLDHLFSRHDLDHGQIVVFGRSLGGAVSIDLAADAVYGAKLMGVIVENTFTSI 223 Query 219 REVA-ESCYPALK--PLIRLFTMVQKDGMENIEKIRNVKVPTFFVGGTNDKDVPPEHTEQ 275 ++A E +PA++ PL+ + ++ +++KI+ V P FV G D VPP Sbjct 224 PDMAVELIHPAVQYLPLV-----LYRNQYLSVDKIQFVSAPILFVSGLADTLVPPRMMTM 278 Query 276 LFQECGAPKKWLKMVEGGTHLHCYGWAVEGWQEDMIDFIRTAREYSG 322 L CG+ +K + + GG+H WAV G+ + + F++ RE G Sbjct 279 LHTRCGSTRKQMLQIVGGSHNDT--WAVNGYYQGVAQFLKECRETKG 323 Lambda K H 0.317 0.135 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 196278837126 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40