bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1065_orf1 Length=253 Score E Sequences producing significant alignments: (Bits) Value 51511.ENSCSAVP00000014544 161 2e-38 > 51511.ENSCSAVP00000014544 Length=628 Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/247 (36%), Positives = 135/247 (54%), Gaps = 17/247 (6%) Query 19 GSAATSLSKPLLILIDRDFDLLTMLQHTWLYGALIHDLLQLRLNRVTVVTPGEGG----- 73 G T+ +PLL++ DR+ DL T L HTW Y ALIHDLL ++LN+VTV + Sbjct 243 GQQITNFQRPLLLIADRNIDLATPLHHTWTYQALIHDLLDMKLNKVTVTETMDSNATGIT 302 Query 74 KPSTTKTFDLEKRDVFWREHAFSPFPVAAAAVSQMLTEYNAELAKVGQRPPDAFAQPEGD 133 +PS T T++L D FW++H +PFP A AV + + EY A +V QR A E D Sbjct 303 RPSKTHTYNLGVSDKFWQQHKGNPFPQVAEAVQEEIEEYKAHEGEV-QRLKTAMGLAESD 361 Query 134 LSADI-------LKAVDVLPDLADKKRSLDAHTTIATALVSAIKDRGLDRYFEIEQSLPQ 186 DI A++ LP L +KKR +D HTTIAT+L+ IK+R LD YFE+E+ + Sbjct 362 EPVDISDNTAKLTSAMNNLPQLLEKKRLIDMHTTIATSLLGGIKERKLDEYFEMEEKMMS 421 Query 187 DRETVVTSAVQQCLSPDSAGLVEDKLRLLACLYLSRPSYPKPLFQSLVSQLEQQGADVSA 246 ++ ++ ++ + G +DK+RL Y+ P + L + G D++ Sbjct 422 --KSATEKSILDFITDPNGGSPDDKMRLFLIFYICLPQVND--LDQITEALRETGCDLAP 477 Query 247 IHFLSRF 253 +HF+ R+ Sbjct 478 LHFIKRW 484 Lambda K H 0.320 0.135 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 77445647488 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40