bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1065_orf1
Length=253
Score E
Sequences producing significant alignments: (Bits) Value
51511.ENSCSAVP00000014544 161 2e-38
> 51511.ENSCSAVP00000014544
Length=628
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 135/247 (54%), Gaps = 17/247 (6%)
Query 19 GSAATSLSKPLLILIDRDFDLLTMLQHTWLYGALIHDLLQLRLNRVTVVTPGEGG----- 73
G T+ +PLL++ DR+ DL T L HTW Y ALIHDLL ++LN+VTV +
Sbjct 243 GQQITNFQRPLLLIADRNIDLATPLHHTWTYQALIHDLLDMKLNKVTVTETMDSNATGIT 302
Query 74 KPSTTKTFDLEKRDVFWREHAFSPFPVAAAAVSQMLTEYNAELAKVGQRPPDAFAQPEGD 133
+PS T T++L D FW++H +PFP A AV + + EY A +V QR A E D
Sbjct 303 RPSKTHTYNLGVSDKFWQQHKGNPFPQVAEAVQEEIEEYKAHEGEV-QRLKTAMGLAESD 361
Query 134 LSADI-------LKAVDVLPDLADKKRSLDAHTTIATALVSAIKDRGLDRYFEIEQSLPQ 186
DI A++ LP L +KKR +D HTTIAT+L+ IK+R LD YFE+E+ +
Sbjct 362 EPVDISDNTAKLTSAMNNLPQLLEKKRLIDMHTTIATSLLGGIKERKLDEYFEMEEKMMS 421
Query 187 DRETVVTSAVQQCLSPDSAGLVEDKLRLLACLYLSRPSYPKPLFQSLVSQLEQQGADVSA 246
++ ++ ++ + G +DK+RL Y+ P + L + G D++
Sbjct 422 --KSATEKSILDFITDPNGGSPDDKMRLFLIFYICLPQVND--LDQITEALRETGCDLAP 477
Query 247 IHFLSRF 253
+HF+ R+
Sbjct 478 LHFIKRW 484
Lambda K H
0.320 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 77445647488
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40