bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1064_orf1 Length=242 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0019 181 2e-44 > 5833.PF13_0019 Length=1920 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 80/155 (51%), Positives = 115/155 (74%), Gaps = 3/155 (1%) Query 2 PVLRRTGYGLSWKEAVLLVWGGLRGGIVLALGLRIERDADLDAELTNILSFFISGSVFLI 61 P L + GY ++ KE +LL+WGGLRGGIVL LGLRIE + ++ +LT L+++ISGSV LI Sbjct 580 PFLSKIGYEVNCKEILLLIWGGLRGGIVLVLGLRIEAENKINEKLTKELAYYISGSVLLI 639 Query 62 LLINGMTFELIYRFLNPYPPKPFRRVYLEAVMRMIDHQYMEDRKALESHWLFKGTDVLAH 121 L I G+TFE +YRFLN YPP PFR VYLE V++MID+ + +K L+++WLFKGT++L Sbjct 640 LTIQGLTFECLYRFLNIYPPNPFRIVYLEKVLKMIDYNFYIRKKNLKNYWLFKGTNILHF 699 Query 122 ADRVVPRLGWRQVDRLGNLDIKSPDIAQAFGCLHE 156 + ++VP L WR++++ G D++ PDI + CL + Sbjct 700 SSKIVPELYWRKMNKYGEFDLRLPDI---YTCLQD 731 Lambda K H 0.328 0.146 0.461 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 70790162157 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40