bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1012_orf4
Length=448
Score E
Sequences producing significant alignments: (Bits) Value
203120.LEUM_1748 75.9 3e-12
> 203120.LEUM_1748
Length=1408
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 92/143 (64%), Gaps = 15/143 (10%)
Query 314 INGINGGNGFNGINGGNGFNGINGGNGFNGINGDGGFNGINGDGGFNGINGDGGFNGVNG 373
+NGING NG +G +G NG +G NG +G +G+NG G NG++G G NGI+G G NG++G
Sbjct 853 VNGINGQNGVDGKDGVNGIDGQNGVDGKDGVNGKDGQNGVDGKDGMNGIDGKDGVNGIDG 912
Query 374 --GSNGFNGVNG--GSNGYTNGGGGVNVVNGDGGFNVGNKGFNGVNGGNGYNGIDG--GI 427
G +G NGVNG G NG +G GVN ++G G + G +GVNG +G NG+DG G+
Sbjct 913 QNGVDGKNGVNGIDGQNG-VDGKNGVNGIDGQNGVD----GKDGVNGIDGQNGVDGKNGV 967
Query 428 N--NGFNG-GGNNGFN-VGGTNG 446
N NG NG G +G N + G NG
Sbjct 968 NGINGQNGVDGKDGINGIDGQNG 990
Lambda K H
0.311 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 187075795405
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40