bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1007_orf6 Length=376 Score E Sequences producing significant alignments: (Bits) Value 402881.Plav_1645 72.8 2e-11 > 402881.Plav_1645 Length=600 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 18/198 (9%) Query 156 LYTADLEGHLRATWVSNSRFLSAGFCWLEAVNLTESDRLLLGVQLSHEVG-LHALAAAIA 214 +YT+ G+ +A + + R LS + N TE DR+ + + L H G + A+ + Sbjct 199 IYTSGTTGNPKAARIPHIRLLSMMGAFAAGTNATEKDRMYVVLPLYHSAGGVCAVGTTLT 258 Query 215 CKGALLLRSRSSLLSLWPDVKAMDATILWHTGMMWCRLLKAHESYQGGDQTQRLGSWSGN 274 G++++R + S + W D AT+ + G + CR L + + + Sbjct 259 VGGSVIIRQKFSATNFWDDAVKYKATLFQYIGEL-CRYLLNTPPHPKERKHK-------- 309 Query 275 PQLRASIGTGLAGALWPVVKKVFNIPRILEFYSPRNLQTPQILFNAWDMLGACAFVPDFA 334 LR +G GL +WP +K F IP ILEFY + F+ GA +P +A Sbjct 310 --LRMVVGNGLRPEIWPAFQKRFKIPHILEFYGATEGNVALMNFDG--TPGAIGRIPGWA 365 Query 335 WNSKELERIVEF---NEK 349 +E IV+F NEK Sbjct 366 KKKFNVE-IVKFDIENEK 382 Lambda K H 0.318 0.133 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 145786424286 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40