bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0999_orf1 Length=134 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_720 80.1 2e-14 > 5807.cgd7_720 Length=364 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 7/119 (5%) Query 1 PRAVVGSLIGKNGGYIQSLRIATGASINISPLFVKAEEACAERVISIECRKKQSLRAAAF 60 PR+V+GS+IG G +I +R AT A INISP+FV +E+AC ER+I+I + A Sbjct 116 PRSVIGSIIGIKGEFISHVRTATSAHINISPIFVTSEKACNERIITISGSNSNQVIHAFI 175 Query 61 TLLKRINTHQDKASCRHVCY-----YRR--HNFESAAAAAAVAAAAAAAAAAATANPAN 112 L K++N+ + SC+ V Y +RR H E +++ NP N Sbjct 176 ILTKKVNSSPEGRSCKSVIYRRADFFRRKNHKTEHEKVDPLLSSQLEEMKNVLNENPIN 234 Lambda K H 0.317 0.123 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22682284714 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40