bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0998_orf4
Length=278
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFL2215w 546 3e-154
> 5833.PFL2215w
Length=376
Score = 546 bits (1407), Expect = 3e-154, Method: Compositional matrix adjust.
Identities = 257/278 (92%), Positives = 272/278 (97%), Gaps = 0/278 (0%)
Query 1 PEEHPVLLTEAPLNPKANRERMTQIMFETFNVPAMYVAIQAVLSLYSSGRTTGIVLDSGD 60
PEEHPVLLTEAPLNPK NRERMTQIMFE+FNVPAMYVAIQAVLSLYSSGRTTGIVLDSGD
Sbjct 99 PEEHPVLLTEAPLNPKGNRERMTQIMFESFNVPAMYVAIQAVLSLYSSGRTTGIVLDSGD 158
Query 61 GVSHTVPIYEGYALPHAMMRLDLAGRDLTEYMMTILHERGYGFTTTAEKEIVRDIKEKLC 120
GVSHTVPIYEGYALPHA+MRLDLAGRDLTEY+M ILHERGYGF+T+AEKEIVRDIKEKLC
Sbjct 159 GVSHTVPIYEGYALPHAIMRLDLAGRDLTEYLMKILHERGYGFSTSAEKEIVRDIKEKLC 218
Query 121 YIALDFDEEMKNAEDSSDIEKSYELPDGNIITVGNERFRCPEALFQPSFLGKEASGVHRT 180
YIAL+FDEEMK +E SSDIEKSYELPDGNIITVGNERFRCPEALFQPSFLGKEA+G+H T
Sbjct 219 YIALNFDEEMKTSEQSSDIEKSYELPDGNIITVGNERFRCPEALFQPSFLGKEAAGIHTT 278
Query 181 TFDSIMKCDVDIRKDLYGNVVLSGGTTMYEGIGERLTKELTSLAPSTMKIKVVAPPERKY 240
TF+SI KCDVDIRKDLYGN+VLSGGTTMYEGIGERLT+++T+LAPSTMKIKVVAPPERKY
Sbjct 279 TFNSIKKCDVDIRKDLYGNIVLSGGTTMYEGIGERLTRDITTLAPSTMKIKVVAPPERKY 338
Query 241 SVWIGGSILSSLSTFQQMWITKEEYDESGPSIVHRKCF 278
SVWIGGSILSSLSTFQQMWITKEEYDESGPSIVHRKCF
Sbjct 339 SVWIGGSILSSLSTFQQMWITKEEYDESGPSIVHRKCF 376
Lambda K H
0.317 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 91589248440
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40