bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0982_orf1 Length=134 Score E Sequences producing significant alignments: (Bits) Value 5691.Tb927.2.5980 171 5e-42 > 5691.Tb927.2.5980 Length=870 Score = 171 bits (434), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 79/119 (66%), Positives = 99/119 (83%), Gaps = 0/119 (0%) Query 7 QAVKAVADALAIQRAGLSPKNKPLGTFMFLGSSGVGKTELVKAVAEEMFDSEKNLIRLDM 66 +AV+ VADA+ RAGLS N P +F+FLG +GVGKTELVKAVA E+FD EK+++R+DM Sbjct 575 EAVERVADAIIRARAGLSRPNSPTASFLFLGPTGVGKTELVKAVAAELFDDEKHMVRIDM 634 Query 67 VEYQEAHSISRLIGPPPGYMGNDEGGQLTEAVRQKPHSVVLFDEVENAHKNLWSVLLPV 125 EY E HS+SRLIG PPGY+G+DEGGQLTE VR++PH+VVLFDEVE AH N+++VLL V Sbjct 635 SEYMEQHSVSRLIGAPPGYIGHDEGGQLTEPVRRRPHAVVLFDEVEKAHPNVYNVLLQV 693 Lambda K H 0.317 0.134 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22682284714 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40