bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0980_orf1 Length=243 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_3770 377 2e-103 > 5807.cgd3_3770 Length=711 Score = 377 bits (967), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 179/218 (82%), Positives = 200/218 (91%), Gaps = 0/218 (0%) Query 24 ETFAFNADIQQLMSLIINTFYSNKEIFLRELISNASDALDKIRYEAITDPEKLKTKPELF 83 ETFAFNADIQQLMSLIINTFYSNKEIFLRELISNASDALDKIRYE++TDPE+LK+ E+ Sbjct 15 ETFAFNADIQQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPEQLKSNEEMH 74 Query 84 IRLIPDKANNTLTIEDSGIGMTKAELVNNLGTIARSGTKAFMEALQAGGDISMIGQFGVG 143 IR+IPDK NNTLTIEDSGIGMTK EL+NNLGTIARSGTKAFMEA+QAGGD+SMIGQFGVG Sbjct 75 IRIIPDKVNNTLTIEDSGIGMTKNELINNLGTIARSGTKAFMEAIQAGGDVSMIGQFGVG 134 Query 144 FYSAYLVADSVTVVSKHNDDEQYVWESAAGGSFTVQKDDKYEPLGRGTRIILHLKEDQGE 203 FYSAYLVAD VTV++KHN DEQY+WES+AGGSFT+ D L RGTRIILHLKEDQ + Sbjct 135 FYSAYLVADKVTVITKHNGDEQYIWESSAGGSFTITNDTSDNKLQRGTRIILHLKEDQLD 194 Query 204 YLEERRLKDLVKKHSEFISFPIELAVEKTHEREVTESE 241 YLEER L+DLVKKHSEFISFPIEL+VEKT E+E+T+S+ Sbjct 195 YLEERTLRDLVKKHSEFISFPIELSVEKTTEKEITDSD 232 Lambda K H 0.316 0.134 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 71395206278 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40