bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0932_orf2 Length=334 Score E Sequences producing significant alignments: (Bits) Value 69293.ENSGACP00000021576 129 2e-28 > 69293.ENSGACP00000021576 Length=309 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 43/257 (16%) Query 76 RGSFCNNTDIALPKKKGSINLGQLMVLSFVVPCIIIILVELLMALVRATEDKDVQGSDSG 135 RG FCN+ I L K+ +++ L + VP + I++ E K G+ Sbjct 61 RGFFCNDNSIGLTYKRSTVSTTMLTAVGATVPVVSIVIGESYRIYFLNEGSKSFVGNP-- 118 Query 136 VSLFGWKVPQFIVDYYTYLGGFGFTMATAWLFADSLKCFVGSLRPHFFDACKPDWSQVKC 195 ++ Y +G F F A + F D K VG +RPHF D CKPD+S + C Sbjct 119 ----------YVSALYKQVGVFIFGCAVSQSFTDIAKVSVGRMRPHFLDVCKPDFSTINC 168 Query 196 KGDHGEYIYVDDFHCQNDPHRVEDARRSFPSGHSTYTMCGMLFGVLYLQARFRWHQQQTA 255 Y+ ++ CQ +V++AR+SF SGH++++M ML+ V YLQ+RF WH Sbjct 169 SLG-----YITEYQCQGPEGKVQEARKSFFSGHASFSMYTMLYLVFYLQSRFTWH----- 218 Query 256 PKKRLRTQQGVFGAFIEKTFWFSQALVPILQALMLLLALYVPATRVLEHFHHVRDVCTGM 315 GA + L P+ Q +++++ Y +RV +H HH DV G Sbjct 219 ------------GA---------RLLRPLTQFTLIMMSFYTGLSRVSDHKHHPTDVLAGF 257 Query 316 LLGGTIAIFGAFFIIDL 332 + G +A FF+ DL Sbjct 258 VQGALVAYCIVFFVSDL 274 Lambda K H 0.328 0.141 0.444 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 123104424358 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40