bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0889_orf1 Length=203 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_3100 118 9e-26 > 5807.cgd3_3100 Length=611 Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 98/161 (60%), Gaps = 0/161 (0%) Query 40 KLRASTARTQAVLNVVCGIEGIDMQLMPASFKALQSDFHWALQDLGSLVFYQSVSQAISG 99 +L + R+ A++ + ++G D QL+PAS +AL+ D + +DLG+++ Q + A+S Sbjct 61 RLHSIALRSIAIVCLAASLDGCDEQLLPASLRALEVDLKLSPKDLGNIILCQILCLALSC 120 Query 100 LFWGLLADRTSRVRLLSIGCAGWGVVAIFLASSTFFWQFALLKVLNGVAMASIGPVAQSL 159 WGLLADR SR +L+ G WG V I LA S+ +W+ + + +NG + S+GP+AQS+ Sbjct 121 PIWGLLADRYSRKYILATGVTVWGFVTILLAFSSSYWEVLITRAVNGAFLGSVGPLAQSV 180 Query 160 IADLFPPTMRGEHFGWLQLFLCAGCILGAMMGGSLASLTVV 200 +AD RG FG +QL C G + GA++ S++ +V Sbjct 181 LADTLNSKNRGLGFGMIQLSSCVGRVFGAVLTTSISQKLIV 221 Lambda K H 0.323 0.136 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 49612009869 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40