bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0888_orf1
Length=257
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFL0720w 179 8e-44
> 5833.PFL0720w
Length=245
Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 114/146 (78%), Gaps = 0/146 (0%)
Query 112 RVEMTKDMICKGTISALVGVLLGIVSSLIVNCTLVEISVSSFFSVYLGIVFITVGAVILW 171
R++ TKD++ KG++SA+VG++LGI+ SLIVNCTLVE+S+S FFS+Y GI+FI VG +I W
Sbjct 15 RIQCTKDLLLKGSLSAIVGMILGIMCSLIVNCTLVEVSLSRFFSMYFGILFIVVGMIIFW 74
Query 172 RINVNADGASQGRRLQLTFFAGLIVFSGVLCFLLKRNWFVGLHAIFKVPLYTVLGVSVAF 231
R+N N ++GR+ QL +GLI+FSG+LCF R+W L + KVP+Y +LG+S++F
Sbjct 75 RLNANVTDEAEGRKNQLMILSGLIIFSGILCFFFDRSWLFSLSPLTKVPIYCILGISISF 134
Query 232 ALTFSLVDVVNYLFSFFQSSVAKPLV 257
ALTFSL+D++NYL F Q S+ +PL+
Sbjct 135 ALTFSLIDLINYLIGFIQGSITRPLI 160
Lambda K H
0.326 0.140 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 79865823972
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40