bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0873_orf1 Length=184 Score E Sequences producing significant alignments: (Bits) Value 9031.ENSGALP00000020822 62.0 9e-09 > 9031.ENSGALP00000020822 Length=173 Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 7/116 (6%) Query 44 TIIRYLCSKSESKAVLLGPEKNADEQAAINQWLCFCALKGYEVTGASD----LNEFNSAL 99 TI +L K K LLG +A+E+A ++QWL + + + D L + N+ L Sbjct 45 TIASHLV-KQAKKEQLLG--SSAEEKAVVHQWLEYRVTQVGRQSSREDTRTVLKDLNAHL 101 Query 100 ERNTFLCGNSLTAADLVGMASVYAFMKKASQRDFQLLKHLTRWYNHMQSLPGIKEQ 155 E +L GNS T AD++ ++ M + ++ ++ +++RW+NH+Q PG+++ Sbjct 102 EDKVYLAGNSFTLADILMYYGLHHVMVDLTVQEKEIYLNVSRWFNHIQHYPGVRQH 157 Lambda K H 0.318 0.130 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 39517472064 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40