bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0860_orf2
Length=184
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0245 251 8e-66
> 5833.PF11_0245
Length=555
Score = 251 bits (641), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 115/185 (62%), Positives = 145/185 (78%), Gaps = 3/185 (1%)
Query 1 PNMIEGAAQADVGVLIISARKGEFETGFEKGGQTREHTLLAKTLGVCQLVVAVNKMDEST 60
PNMI GAAQAD+GVLIISARKGEFETGFE+GGQTREHTLLA+TLG+ QL+VA+NKMD+ T
Sbjct 212 PNMISGAAQADIGVLIISARKGEFETGFERGGQTREHTLLARTLGINQLIVAINKMDDPT 271
Query 61 CQWNEERYREIIKKTKPFFQGCGFVLGKNLSYIPISGLGGHNLKEHVSRPGSSCLDTRAA 120
C W+E RY EI KK P+ + CG+ + K++ ++PISGL G NL EHVS S D RA+
Sbjct 272 CNWSESRYEEIQKKITPYIKSCGYNINKDVFFVPISGLTGQNLSEHVSDKNSKIYDPRAS 331
Query 121 WYPADEPTLFELLNTLTPPPRKPNAPLRVPILDGYKDNGVTALGKVEAGTVTFG--MQAI 178
WY +PTLF +LN+L PPP N PLR+P+L+GYKDNG+ A+GK+E+GT+ +G M
Sbjct 332 WYDLSKPTLFNILNSLPPPPWDENGPLRIPLLEGYKDNGIIAIGKIESGTL-YGNNMNCT 390
Query 179 LMPSK 183
LMP+K
Sbjct 391 LMPNK 395
Lambda K H
0.317 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 39517472064
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40