bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0839_orf2 Length=185 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI1170c 196 4e-49 > 5833.PFI1170c Length=541 Score = 196 bits (497), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 90/173 (52%), Positives = 124/173 (71%), Gaps = 7/173 (4%) Query 1 ELTPAAIRAGELLARRLFKNQTEVFCLEHVPTTVFTPVEYGCVGLSEEDAIAKYGEENLE 60 EL P AI+AGE+LARRLFK+ E+ ++PT+++TP+EYG G SEE A YG+ N+E Sbjct 364 ELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVE 423 Query 61 VYLREFSPLEVSACHRQKIKQRDEEDKGAEDEDEDTSLSPCCLAKLICLRKDKQRVVGIH 120 V+L+EF+ LE+SA HRQK + A+ ++ D +S CLAKL+CL+ + RV+G H Sbjct 424 VFLQEFNNLEISAVHRQKHIR-------AQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFH 476 Query 121 FVGPEAGEVLQGMALAIRLGATKEDFDSTVGIHPTNAECFMQLQITKRSGENW 173 +VGP AGEV QGMALA+RL K+DFD+ +GIHPT+AE FM L +T SG ++ Sbjct 477 YVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPTDAESFMNLFVTISSGLSY 529 Lambda K H 0.318 0.136 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 40134932565 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40