bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0819_orf1 Length=160 Score E Sequences producing significant alignments: (Bits) Value 3702.AT2G25280.1 117 1e-25 > 3702.AT2G25280.1 Length=291 Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 91/157 (57%), Gaps = 4/157 (2%) Query 5 SAGVYLTPLGDLPLDTDTLQALRLTGAFCEASISEDEEEHSIELMLPFVRHTF-SEGVKI 63 +A VY TP+G+LP+D + ++ +R G F + DE EHS+E+ LP++ F VK+ Sbjct 90 TATVYKTPIGNLPVDVEMIKEIRAMGKFGMMDLRVDEAEHSMEMHLPYLAKVFEGNNVKV 149 Query 64 VPMIVGDLKSLEDCQKYADLLINYFLQDENLFIVSSDFCHWGPRYSYFYLEDPQPGVPIH 123 VP++VG + S E+ Y +LL Y +N F VSSDFCHWG R++Y + ++ IH Sbjct 150 VPILVGAV-SPENEAMYGELLAKYVDDPKNFFSVSSDFCHWGSRFNYMHYDNTHGA--IH 206 Query 124 AAIEKMDRKAVKFITEHQGQGFYDYLESTGLSVCGRH 160 +IE +D+K + I F YL ++CGRH Sbjct 207 KSIEALDKKGMDIIETGDPDAFKKYLLEFENTICGRH 243 Lambda K H 0.321 0.140 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 26871144147 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40