bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0806_orf1 Length=149 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0233 158 4e-38 > 5833.PF13_0233 Length=818 Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 72/147 (48%), Positives = 108/147 (73%), Gaps = 3/147 (2%) Query 1 IMASNPLLQSFGNAKTIRNNNSSRFGRFMQLSISSDAGIKHGAITNFLLEKVRLVSQEPG 60 IMA+NP+L++FGNAKTIRNNNSSRFGRFMQL IS + GI++G++ FLLEK R+++Q+ Sbjct 224 IMAANPVLEAFGNAKTIRNNNSSRFGRFMQLVISHEGGIRYGSVVAFLLEKSRIITQDDN 283 Query 61 ERSFHVLYQLLKGADQEMISKYHLRPINQYVFLTARSGGCFDIEGIDDRQEFQELRQSFV 120 ERS+H+ YQ LKGA+ M SK+ L+ + +Y L S ++ G+DD ++F+E+ +S Sbjct 284 ERSYHIFYQFLKGANSTMKSKFGLKGVTEYKLLNPNST---EVSGVDDVKDFEEVIESLK 340 Query 121 SMGLPAEDESAVFSILSGVLLIGNTKI 147 +M L D +FSI++G+L +GN ++ Sbjct 341 NMELSESDIEVIFSIVAGILTLGNVRL 367 Lambda K H 0.320 0.136 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22854363588 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40