bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0785_orf2
Length=150
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd8_4740 86.7 2e-16
> 5807.cgd8_4740
Length=267
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 15/108 (13%)
Query 5 GETAEFLHFNVSHDEGLVVFGASRHLVGVDCMRCSPRGSR---------DTTQFLQQMKA 55
E+ LHFNVSHD +VV S+++VG+D M+ SR +FL MK
Sbjct 50 SESDSLLHFNVSHDGDVVVIILSKYMVGIDIMKTELSPSRVQLSNNIMEANEKFLNNMKN 109
Query 56 HCTARDWAYIMGVRLPEQQIRRFMRVWTVKEAFVKAIGTGIYIDPERL 103
+W YI ++ I +FM WT+KE+FVK IG G+Y+DP RL
Sbjct 110 VFHPSEWEYI------QKDISKFMHYWTIKESFVKYIGLGLYVDPRRL 151
Lambda K H
0.324 0.139 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22764965652
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40