bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0779_orf2 Length=202 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd4_3090 83.2 4e-15 > 5807.cgd4_3090 Length=538 Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 73/166 (43%), Gaps = 4/166 (2%) Query 40 DEDVMDAAEECHAGWTLTNGQCIKEKERKSISPCPPKAAIDGGECVVERSIKADLSCGPG 99 + DV+ EC G+T++ QC + S CP K + G+CV + A L C PG Sbjct 48 NTDVLAPIIECPQGYTISGKQCTRTIFVPSSVNCPKKYELREGQCVRKEYSSAVLVCEPG 107 Query 100 QELIGDKCEYEEKTVALSSCPKGYIYNGVGCSKTQEIAGAVSCPSGFKLSGDACIRETKQ 159 ELIG +C + A CP G+ G C +E A CP GF+ C+R+ Sbjct 108 FELIGGRCITRQSVQAERICPHGFALAGEECISMKEFAADYRCPPGFQRKHQECVRDIST 167 Query 160 KAAAVCPPNSEFAGND----KCIMMETIPLSRSCPLGFTLQDGECV 201 CPP E +C ET+ + SC G+ L+ CV Sbjct 168 DPLESCPPGFEPVDKHGRMVQCTRTETVDVILSCKQGYELRGDICV 213 Lambda K H 0.319 0.135 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 48999515920 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40