bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0777_orf2
Length=235
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT4G36940.1 231 2e-59
> 3702.AT4G36940.1
Length=559
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 150/220 (68%), Gaps = 7/220 (3%)
Query 14 LFGVWPEANFHQMAKEGELAAFAAYAMTFPDNFLALVDTYNTLSSGIPNFLAVALAMFKL 73
L G++ E N + ELAAF +YA+ FP++FLALVDTY+ + SGIPNF AVALA+ +L
Sbjct 270 LQGIFSETN------QSELAAFISYALAFPNSFLALVDTYDVMKSGIPNFCAVALALNEL 323
Query 74 GAKPKGVRIDSGDLAYLSREARRMFKQCEEAFGFP-FGGLSIVLSNDLNEATITALNDEG 132
G K G+R+DSGDLAYLS E R+ F E P FG + + SNDLNE T+ ALN +G
Sbjct 324 GYKAVGIRLDSGDLAYLSTEVRKFFCAIERDLKVPDFGKMIVTASNDLNEETVDALNKQG 383
Query 133 HEADVFGIGTNVVTCQAQPALGVVYKLVELEGKPCMKLSEDVEKTSLPTAKAAYRLYNKE 192
HE D FGIGTN+VTC AQ ALG V+KLVE+ +P +KLSEDV K S+P K YRL+ KE
Sbjct 384 HEVDAFGIGTNLVTCYAQAALGCVFKLVEINNQPRIKLSEDVTKVSIPCKKRTYRLFGKE 443
Query 193 GVPAVDLIQSASMPRPVCGEKLFCKDLYADKRRCFFSPRR 232
G P VD++ + P P GE+L C+ + + +R + P+R
Sbjct 444 GYPLVDIMTGENEPPPKVGERLLCRHPFNESKRAYVVPQR 483
Lambda K H
0.321 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 67435541067
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40