bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0777_orf2 Length=235 Score E Sequences producing significant alignments: (Bits) Value 3702.AT4G36940.1 231 2e-59 > 3702.AT4G36940.1 Length=559 Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 115/220 (52%), Positives = 150/220 (68%), Gaps = 7/220 (3%) Query 14 LFGVWPEANFHQMAKEGELAAFAAYAMTFPDNFLALVDTYNTLSSGIPNFLAVALAMFKL 73 L G++ E N + ELAAF +YA+ FP++FLALVDTY+ + SGIPNF AVALA+ +L Sbjct 270 LQGIFSETN------QSELAAFISYALAFPNSFLALVDTYDVMKSGIPNFCAVALALNEL 323 Query 74 GAKPKGVRIDSGDLAYLSREARRMFKQCEEAFGFP-FGGLSIVLSNDLNEATITALNDEG 132 G K G+R+DSGDLAYLS E R+ F E P FG + + SNDLNE T+ ALN +G Sbjct 324 GYKAVGIRLDSGDLAYLSTEVRKFFCAIERDLKVPDFGKMIVTASNDLNEETVDALNKQG 383 Query 133 HEADVFGIGTNVVTCQAQPALGVVYKLVELEGKPCMKLSEDVEKTSLPTAKAAYRLYNKE 192 HE D FGIGTN+VTC AQ ALG V+KLVE+ +P +KLSEDV K S+P K YRL+ KE Sbjct 384 HEVDAFGIGTNLVTCYAQAALGCVFKLVEINNQPRIKLSEDVTKVSIPCKKRTYRLFGKE 443 Query 193 GVPAVDLIQSASMPRPVCGEKLFCKDLYADKRRCFFSPRR 232 G P VD++ + P P GE+L C+ + + +R + P+R Sbjct 444 GYPLVDIMTGENEPPPKVGERLLCRHPFNESKRAYVVPQR 483 Lambda K H 0.321 0.137 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 67435541067 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40