bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0757_orf1 Length=143 Score E Sequences producing significant alignments: (Bits) Value 56780.SYN_00020 102 4e-21 > 56780.SYN_00020 Length=333 Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 55/128 (42%), Positives = 79/128 (61%), Gaps = 3/128 (2%) Query 1 EWRNGKQHGRGEQRQAHGVVYTGQFNQGQIDGFGRLTRADGSKYEGEFVKGKAETRTRPG 60 EW + HGRG G Y G+F +G+ +G G LT ADG++Y G+F KG + R G Sbjct 201 EWASDLFHGRGMDVYHDGKTYEGEFKEGRYEGQGTLTLADGTRYTGKFAKGLSCGR---G 257 Query 61 VYTFPDGSKYVGHWKQDKRHGEGCETLADGSKYRGQFVDGLKSGHGVMTASNGDTYEGEF 120 + +P+G +Y G ++ +K HGEG TL DG Y G+ +GL GHG+MT +G TY G+F Sbjct 258 ILRYPNGDRYEGEFRNNKYHGEGTLTLIDGRTYTGEMEEGLPHGHGIMTFPDGRTYTGKF 317 Query 121 QQGEMSGE 128 ++G+ GE Sbjct 318 RKGQFFGE 325 Lambda K H 0.314 0.136 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22654093455 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40