bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0746_orf1 Length=265 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd6_500 117 3e-25 > 5807.cgd6_500 Length=1967 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 32/272 (11%) Query 1 HAVHVAQMCWLFLTRYSCRDDLTLTEQLGLMLAALAHDVDHPGVNNNSLIEEHHPLAIIY 60 HA+ V Q+C++ L + L + L+ AAL HD+DHPGVNN L + LA+ Y Sbjct 1556 HALQVVQVCYIILRNFGIMLVLNDLNKFILLFAALCHDIDHPGVNNCFLTISNSKLALKY 1615 Query 61 NDKAVLENHHAAFATSAMMKL-GLFSRKT------KNVRKSPCLPSSALSSGAPSDASLV 113 ND ++LENHH + S + K L RK KN R+ S LS+ +L+ Sbjct 1616 NDNSILENHHCNYIFSLLDKCQDLDIRKNFNDFEKKNFRR--IFIRSVLSTDMSYHNTLL 1673 Query 114 GDAQTFLTSSVFGAVSQQSEGEHDWADDEDDHTFYPSFAEVRRVLISCILATDMELFRHH 173 + + F++++ + + + L D E ++ Sbjct 1674 SNLEEFISTNNNNNNNINNN--------------------NYYYCHNQNLIFDEEELNNN 1713 Query 174 HEAMRKRGQMKRTTGDLLNSDEDHALLVTCLIHCADISNPLLPERRNVQWASLIIQEFNA 233 + ++ G++ + L D L+ L+H ADISNP+ P +W+SLI++EFN Sbjct 1714 NINIKMLGEIDENS---LLIKMDKEFLIETLLHAADISNPITPFPICAKWSSLIVEEFNY 1770 Query 234 QVEMERHEGLPVTVFMDARTELLRTQSQIGFL 265 Q ++E GLP+T FMD + ++ + ++QIGFL Sbjct 1771 QSKLESQFGLPITPFMDLKDDITKIEAQIGFL 1802 Lambda K H 0.321 0.132 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 83755957455 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40