bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0742_orf1
Length=146
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF07_0066 85.5 4e-16
> 5833.PF07_0066
Length=1125
Score = 85.5 bits (210), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/136 (33%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
Query 3 KIRQLVETFGPLKSFDILKKDTDESQLVCVIEYADADSQQQAMEILHTNSPYRVVTAEHA 62
KI++L+E FG +K+F+ D + ++EY + ++ QA +IL+ N+ Y++
Sbjct 804 KIKELLEAFGEIKNFEFFYGDETSDTYISLVEYVNTENAIQAHKILNQNTSYKIQFEHEI 863
Query 63 INEGAVSSFLKEKISMVGSGAAPPLLRPQVCTRVLVLHNIVTPQDLQDEDEYADIVEDIR 122
IN+ +++ +K K + +L QV T+V+VL+ I T ++L D EY DIVEDI+
Sbjct 864 INDPHINNIIKNKYMKTENS----ILSLQVPTKVIVLNKIATFEELSDSSEYKDIVEDIK 919
Query 123 LECEECGGRVVDVQVP 138
+EC++ G+ ++V +P
Sbjct 920 IECDKY-GKTLEVVLP 934
Lambda K H
0.318 0.136 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22393349475
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40