bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0741_orf1
Length=136
Score E
Sequences producing significant alignments: (Bits) Value
7719.ENSCINP00000012333 100 2e-20
> 7719.ENSCINP00000012333
Length=360
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 18/148 (12%)
Query 1 GVVVVATSNRPPDDLYLGGLNRERFISFIPLLKTFCNIHHIETQKDYRLAKGAKSSGSLF 60
GVV+VATSNRPP+DLY GGL R FI FI +LKT C I++Q DYRL GA G ++
Sbjct 114 GVVMVATSNRPPEDLYKGGLQRSNFIPFIDILKTHCTSCCIDSQTDYRLL-GAPCDGQVY 172
Query 61 FVPS-----RAKEIIFKQIEGAAGGSLESGSIPLAANRTLR-------VPGMRKGYAVFT 108
+ S + + IFK S++SGS +A ++TLR VP A FT
Sbjct 173 LLTSDPQTDKNMDEIFK-----YHVSMQSGSTSVATSKTLRVLGRDLQVPKFCGRVADFT 227
Query 109 FDDLCGDNVGAVDYLYISSVLHSLSIRN 136
F+ +C VGAVDY+ +S + IR+
Sbjct 228 FEQICMQAVGAVDYIELSKEFDIILIRD 255
Lambda K H
0.322 0.140 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22513421946
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40