bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0741_orf1 Length=136 Score E Sequences producing significant alignments: (Bits) Value 7719.ENSCINP00000012333 100 2e-20 > 7719.ENSCINP00000012333 Length=360 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 18/148 (12%) Query 1 GVVVVATSNRPPDDLYLGGLNRERFISFIPLLKTFCNIHHIETQKDYRLAKGAKSSGSLF 60 GVV+VATSNRPP+DLY GGL R FI FI +LKT C I++Q DYRL GA G ++ Sbjct 114 GVVMVATSNRPPEDLYKGGLQRSNFIPFIDILKTHCTSCCIDSQTDYRLL-GAPCDGQVY 172 Query 61 FVPS-----RAKEIIFKQIEGAAGGSLESGSIPLAANRTLR-------VPGMRKGYAVFT 108 + S + + IFK S++SGS +A ++TLR VP A FT Sbjct 173 LLTSDPQTDKNMDEIFK-----YHVSMQSGSTSVATSKTLRVLGRDLQVPKFCGRVADFT 227 Query 109 FDDLCGDNVGAVDYLYISSVLHSLSIRN 136 F+ +C VGAVDY+ +S + IR+ Sbjct 228 FEQICMQAVGAVDYIELSKEFDIILIRD 255 Lambda K H 0.322 0.140 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22513421946 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40