bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0722_orf2 Length=160 Score E Sequences producing significant alignments: (Bits) Value 315750.BPUM_3004 134 1e-30 > 315750.BPUM_3004 Length=281 Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/150 (43%), Positives = 108/150 (72%), Gaps = 3/150 (2%) Query 11 NRQRRIESWRALEQLYEEKKVRAIGVSNFLVPHLEQLMEDGAKIRPMVDQIEWHPMCWVP 70 N + ++WRALE+LY++ KVRAIGVSNF + HLE+L++D A++ P V+Q+E+HP + Sbjct 117 NAETFKDTWRALEKLYKDGKVRAIGVSNFYIQHLEELLKD-AEVVPAVNQVEFHPKLTLV 175 Query 71 DLIPYAEKHNITLQAYSSLGSGENRLMEHEVVKQIAKEINKSPSVVLLRWPLQQGLVVIP 130 +L YA++ I ++A+S L G +L++H+V+K +A NKS + V+LRW LQ G+V IP Sbjct 176 ELRQYAKEKGIQIEAWSPLMQG--KLLDHDVLKDMAARYNKSVAQVILRWDLQSGVVTIP 233 Query 131 CSTSQEHLRENLEALDVELSEDQMKRLCAI 160 S ++E +++N + D ELS++ M+++ A+ Sbjct 234 KSINEERIKQNADIFDFELSKEDMEKIDAL 263 Lambda K H 0.317 0.132 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 26871144147 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40