bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0684_orf1 Length=153 Score E Sequences producing significant alignments: (Bits) Value 6239.F08F8.7.3 155 4e-37 > 6239.F08F8.7.3 Length=227 Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 79/154 (51%), Positives = 107/154 (69%), Gaps = 6/154 (3%) Query 1 PVVRCLRRHIPS-TFFDIHLMVNNPENLVEELNSSDASQITFHLESVDNNEEAAAALCSK 59 PVV LR+ + + FFD+HLMV+NP VE + + ASQ TFH E+VD + A + L K Sbjct 52 PVVESLRKSLGAEPFFDVHLMVSNPGQWVEPMAKAGASQFTFHYEAVDGDV-AVSELIEK 110 Query 60 IRSKGIKAGIAIKPNTSIQ-LVKHLLTNNLIDNLLIMTVEPGFGGQTFMNNQMSKVKEAR 118 IR G+K G+++KP TS++ ++KH N +DN LIMTVEPGFGGQ FM N M KV+ R Sbjct 111 IRKSGMKVGLSVKPGTSVEHILKH---ANHLDNALIMTVEPGFGGQKFMENMMEKVRTIR 167 Query 119 HLNPNIDIQVDGGLNEETVKIAAESGANVIVAGT 152 PN+ IQVDGG+ E ++I+A++GAN IV+GT Sbjct 168 SKYPNLTIQVDGGVTPENIEISAQAGANAIVSGT 201 Lambda K H 0.315 0.131 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23213563385 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40