bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0674_orf2 Length=300 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0055 206 8e-52 > 5833.PF11_0055 Length=424 Score = 206 bits (524), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 111/271 (40%), Positives = 166/271 (61%), Gaps = 9/271 (3%) Query 33 LLSLLPPFPHQGPKD--AEGLIKAVRSLIPSNVKSVANQKELDALIASTVQMPKALFFSD 90 L+ + P P KD E IK LIPS + + + + + ++ MPK L FS+ Sbjct 120 LIYPINPMPKFVFKDEITESNIKKYTYLIPSKIDIIKDTQSFNVFLSKHENMPKVLIFSN 179 Query 91 KLTKPSLLVKALSNAFKDKLAFVLLNRDQFPEAVKKYKVSSFPHLVVVRKDKKDEVYKGA 150 K KP+ ++ ALSN+F KL F +N + E V KY V + P +++++K+K + YKG Sbjct 180 K-KKPNYVLNALSNSFNKKLMFAYINNEN-EELVAKYNVKNLPTILLLKKNKVVDTYKGK 237 Query 151 FELQKLFDWLNVFSETFVMGGGFSDTAPAAEFDPELQPWKVESIPELTKQSSQHVCFKKS 210 +FDWLNV+SETFV+GGGF D +P + +PWK E IP+ TK S +CFKK+ Sbjct 238 QNYINIFDWLNVYSETFVLGGGF-DISPDKTNE---KPWKFELIPKFTKLSHGDICFKKA 293 Query 211 NKFVCVMLAKRGRELAPEELEVMESLKEDYEGH-DGKGPDFRFMWIDLATEKEWAELFDI 269 +K +C++ K G +L E++++ SLKE ++ H DG+G +FRFMWID+A E + L + Sbjct 294 DKGLCLIYLKEGEKLEKSEIDMLLSLKEKFKPHIDGRGINFRFMWIDIAMETHFRSLLEF 353 Query 270 TNTPSVVAINPHKKVRFLKLDGDLPATKPHI 300 PSVV NP+K++R+ KL+ DL ATK +I Sbjct 354 KKYPSVVVFNPYKRIRYAKLNEDLTATKENI 384 Lambda K H 0.318 0.134 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 103813419437 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40