bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0665_orf3 Length=222 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_4470 115 9e-25 > 5807.cgd7_4470 Length=453 Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 96/188 (51%), Gaps = 49/188 (26%) Query 3 PPRGVMEKFVQLCEACDGAVAVHCKAGLGRTGSLIGCYAMKNHKFPALPWIGWNRICRPG 62 PP+ ++ +F++L E G AVHCKAGLGRTG+L+GCYA+KN++F A WIGWNRI RPG Sbjct 261 PPQNILNRFLELTENEKGVFAVHCKAGLGRTGTLLGCYAIKNYRFTASAWIGWNRIARPG 320 Query 63 SVLGPQQYFLCAIQDEL----------MKLDA-----APGCLPVVQQQ---------HSS 98 SVLGPQQ FL I+ L M+LD A VQ+Q S Sbjct 321 SVLGPQQQFLHEIEPNLFARGSILPPEMRLDTKIPLIARKVQDAVQKQAKIRQIQCISSQ 380 Query 99 CTAARDSGVDSLTLLLE-------------DMGLEDK------------QIAEHGDEGQG 133 ++S + + ++ D+ +E + IA GD GQG Sbjct 381 FMENKNSDLSKYPITMQQNKISKDTTNNHDDISIEQEVIQMMSNLSAVDNIAILGDAGQG 440 Query 134 DRLMLAKR 141 +RL+ AK+ Sbjct 441 ERLVHAKK 448 Lambda K H 0.316 0.131 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 60391056627 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40