bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0664_orf1 Length=129 Score E Sequences producing significant alignments: (Bits) Value 59463.ENSMLUP00000004645 71.2 9e-12 > 59463.ENSMLUP00000004645 Length=99 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 1/55 (1%) Query 56 PAEADETE-QLLRRFDMEAMYGPCVGLTREERWKRAAEMGLDPPAEVMQALQRHP 109 P DE E +LLR+FD+ YGPC G+TR +RW RA +MGL+PP EV Q LQ HP Sbjct 38 PLSVDEVELELLRQFDLAWQYGPCTGITRLQRWHRAEQMGLEPPPEVYQVLQTHP 92 Lambda K H 0.314 0.127 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22342951125 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40