bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0629_orf3 Length=320 Score E Sequences producing significant alignments: (Bits) Value 44689.DDB_0231601 133 6e-30 > 44689.DDB_0231601 Length=886 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 80/251 (31%), Positives = 129/251 (51%), Gaps = 61/251 (24%) Query 11 FGETGQLTEAVRQKPHSVVLFDEVENAHKNLWSLLLPMLDEGHLTDTKNVRVDFTSTIII 70 + + GQLTEAVR++P+SVVLFDEVE AH+ +W++LL +LDEG LTD + VDF++ +II Sbjct 658 YDQGGQLTEAVRRRPYSVVLFDEVEKAHQQVWNVLLQVLDEGRLTDGQGRTVDFSNVVII 717 Query 71 MTSNIGQQYILEGYKEARAMAGGAVTPLAHFNKDKNSLEKFAMAKAGANVAGSFESKDQK 130 MTSN+G QYIL G +K+ Sbjct 718 MTSNLGSQYIL----------------------------------------GEQANKEGG 737 Query 131 KGSTAEAVEKKKGEQWNTGNSPKEVLTKMRQKVMQEVLGYFKPQVIGRMTKIVIFEPLTE 190 S ++A + K V+ ++R+ E L R+ I++F PL++ Sbjct 738 NNSLSQACKDK-------------VIDEVRKHFRPEFL--------NRLDDIIVFTPLSK 776 Query 191 SAMRGVLDLMFSHLIKELSKRGITLEVSDSAKAFILGRAWSHKYGGRRMAKYIEKYITSK 250 + ++ L + K L + ++L++S+ A I+ A+ +GGR + +YIEK I ++ Sbjct 777 ENLHSIITLQLRSVEKRLEDQNMSLKISNDALDSIINAAYDPIFGGRPLKRYIEKNIVTE 836 Query 251 VAPLLLSGKLK 261 ++ L+L GKLK Sbjct 837 LSKLILGGKLK 847 Lambda K H 0.315 0.132 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 114738104256 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40