bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0612_orf1 Length=167 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0183 127 2e-28 > 5833.PF10_0183 Length=2405 Score = 127 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 58/139 (41%), Positives = 87/139 (62%), Gaps = 1/139 (0%) Query 29 VRRISKKIVQDVTWSPTRDEFVLIEGKSPSDIVLLDRQGRTQFVFPRRYRNFVSFCPFGQ 88 ++RI++++ QDV WS RDEF++IEGKS + I+L D + +Y+N + + PFG Sbjct 409 IKRINEQVAQDVKWSNIRDEFLIIEGKSDNIILLYDHDLNVKCKIYSQYKNTIKWGPFGN 468 Query 89 MAVVAGFGNLAGEVSFYYRDKASQGMQHISEFKAPCTVLALWAPCGSYFATASTYPRMKV 148 M + GFGNLAG+++FYY++ + I +++ CTVL W+ G+ F TASTYPRMKV Sbjct 469 MIALGGFGNLAGDINFYYKE-VDNSVSIIKKYREACTVLCDWSYDGTLFMTASTYPRMKV 527 Query 149 DNCLSVLDYRGESVQRLQF 167 +N + Y G V F Sbjct 528 ENVFKIYTYEGTLVNSYNF 546 Lambda K H 0.325 0.136 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 30498925597 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40