bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0598_orf1 Length=127 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0147 142 2e-33 > 5833.PF13_0147 Length=527 Score = 142 bits (359), Expect = 2e-33, Method: Composition-based stats. Identities = 61/86 (70%), Positives = 71/86 (82%), Gaps = 0/86 (0%) Query 1 LTEQMFQEMVWEEMKIRGFCSNPNVNPVLYVWFAKDKGNYGFVEFTSVEETERALTMDGM 60 L+E FQE+VW EMK R +C++ N+NPVLYVWFAKDKGNYGFVEF +VEETERALTMDGM Sbjct 254 LSENAFQEIVWNEMKKRKYCNDENINPVLYVWFAKDKGNYGFVEFATVEETERALTMDGM 313 Query 61 LCLGVPLKVSRPNDYTTTSSAQTHAM 86 +C GV LKVSRPNDY+T + Q M Sbjct 314 ICKGVALKVSRPNDYSTNTVKQNQNM 339 Lambda K H 0.319 0.133 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22506847341 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40