bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0592_orf1 Length=315 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0108 251 2e-65 > 5833.PF08_0108 Length=573 Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/251 (48%), Positives = 174/251 (69%), Gaps = 7/251 (2%) Query 9 VDNFKLGPYDVRGQTFGLVERETEHNQHG--NIFQSINFEGIVGLGFPDMSSTGATPIYD 66 D F LG + VR QTFGLVE E+ +N++G NIF I+FEGIVGLGFP M S G P +D Sbjct 322 TDTFMLGKHLVRNQTFGLVESESNNNKNGGDNIFDYISFEGIVGLGFPGMLSAGNIPFFD 381 Query 67 NMLQQANVEKSEFAFYVAKDSPVSAIFFGGVDPRFFEPPIHMFPVVREHYWEVELDAIYV 126 N+L+Q +F+FY++ S + GG+ F+E I+M PV++E YWEV+LD +Y+ Sbjct 382 NLLKQNPNVDPQFSFYISPYDGKSTLIIGGISKSFYEGDIYMLPVLKESYWEVKLDELYI 441 Query 127 GEKKFCCAEGTKNYVIIDSGTSFNTLPSNEMESFLEMIPSQECGEDD--SFLEQYPNSTY 184 G+++ CC E ++YVI D+GTS+NT+PS++M++FL +I S C E + L+ YP Y Sbjct 442 GKERICCDE--ESYVIFDTGTSYNTMPSSQMKTFLNLIHSTACTEQNYKDILKSYPIIKY 499 Query 185 IIGGVGFVLEPQDYLVRSKANICKPAYMQIDVPSDFGHAYILGSMSFMRHFFTVFRRSDG 244 + G + L P++Y++ + ++C PAYMQIDVPS+ HAY+LGS+SFMR+FFTVF R Sbjct 500 VFGELIIELHPEEYMILND-DVCMPAYMQIDVPSERNHAYLLGSLSFMRNFFTVFVRGTE 558 Query 245 VNPSLVGIARA 255 PS+VG+ARA Sbjct 559 SRPSMVGVARA 569 Lambda K H 0.319 0.136 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 111750132791 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40