bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0589_orf4 Length=418 Score E Sequences producing significant alignments: (Bits) Value 59463.ENSMLUP00000012127 73.6 1e-11 > 59463.ENSMLUP00000012127 Length=497 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 18/162 (11%) Query 254 PSSAKLSATKQMLLAVVRMHDIGLVHSDIKSQNFFVKKDGRVFLGDYSLAHPVGQ--QSA 311 P L+ QM L V +H ++H DIKS+N F+ ++G+V LGD+ AH + A Sbjct 89 PEDMILNWFTQMCLGVNHIHKKHVLHRDIKSKNIFLTQNGQVKLGDFGSAHLLSNPMAFA 148 Query 312 C-FEGTATYLPPENLQCMLSSARSIKLTESKDAWALGVVFFKIWCFLSRPYGADQMLYEE 370 C + GT Y+PPE + M + +S D W+LG V +++ C L P+ A+ ++ Sbjct 149 CTYVGTPYYVPPEIWENMPYNNKS-------DIWSLGCVLYEL-CTLKHPFQANS--WKS 198 Query 371 MIEKIAAVRIEDLDFSGCSYDTPIAVLHMIRLLVDPDPARRP 412 +I K+ + L S SY+ + H+I+ + +P+ RP Sbjct 199 LILKVCQGSVSPLP-SHYSYE----LQHLIKQMFKRNPSHRP 235 Lambda K H 0.322 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 169371461455 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40