bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0587_orf1 Length=174 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0233 243 2e-63 > 5833.PF13_0233 Length=818 Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 113/174 (64%), Positives = 141/174 (81%), Gaps = 0/174 (0%) Query 1 KNFVDIVFTREARLYKEEEVSTAELVYTSNAEVIGLLTDKKSSILSSLEDQCLAPGGSDE 60 KNFVDIVF RE++LYK+E +STAEL YTSN EVI +L +K S+LS LEDQCLAPGG+DE Sbjct 495 KNFVDIVFERESKLYKDEGISTAELKYTSNKEVINVLCEKGKSVLSYLEDQCLAPGGTDE 554 Query 61 KFVAACKTAFTNNPKFKPAKVSPNINFLVSHTIGDTQYSAEGFLFKDKDVLRAEIMEVVQ 120 KFV++C T N KF PAKV+ N NF++ HTIG QY AE FL K+KDVLR +++EV++ Sbjct 555 KFVSSCATNLKENNKFTPAKVASNKNFIIQHTIGPIQYCAESFLLKNKDVLRGDLVEVIK 614 Query 121 ASTNVVVKELFAGIVMEKGKMAKGQLIGSQFLKQLEALMDLINSTEPHFVRCVK 174 S N +V++LF G V+EKGK+AKG LIGSQFL QL +LM+LINSTEPHF+RC+K Sbjct 615 DSPNPIVQQLFEGQVIEKGKIAKGSLIGSQFLNQLTSLMNLINSTEPHFIRCIK 668 Lambda K H 0.317 0.132 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 34096907735 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40