bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0581_orf1 Length=336 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0234 477 3e-133 > 5833.PF13_0234 Length=583 Score = 477 bits (1227), Expect = 3e-133, Method: Compositional matrix adjust. Identities = 218/336 (64%), Positives = 262/336 (77%), Gaps = 0/336 (0%) Query 1 YAGEMKKGILTLMMYLMPKQGRLPLHSSCNIGDKGDVTLFFGLSGTGKTTLSADPRRELI 60 YAGEMKKGILTL MY MPK+G+LPLHSSCNIG K DVTLFFGLSGTGKTTLSAD R LI Sbjct 244 YAGEMKKGILTLFMYKMPKEGKLPLHSSCNIGKKNDVTLFFGLSGTGKTTLSADANRYLI 303 Query 61 GDDEHVWTSKGVFNIEGGCYAKCKDLSREQEPEIYNAIRFGAVLENVVLEEEERNVDFSD 120 GDDEHVWT G+FNIEGGCYAKCK LS+ QEPEIY AI+FGA+LENVV++ R VD+++ Sbjct 304 GDDEHVWTDDGIFNIEGGCYAKCKGLSKRQEPEIYKAIKFGAILENVVMDPVTREVDYNN 363 Query 121 STITENTRCAYPLHFIPNAKIPAAVNRHPSNIILLTCDAFGVLPPVWKLSASQVMYHFIS 180 TITENTRCAYPL +I NAKIPA ++ HP NIILLTCDAFGV+PP+ KL Q+MYHF+S Sbjct 364 CTITENTRCAYPLSYIENAKIPAYIHTHPQNIILLTCDAFGVIPPLCKLDVYQMMYHFVS 423 Query 181 GYTSKMAGTEIGILKPAATFSACYGSPFLAMHPMVYAEMLAAKLQQYNADAWLLNTGWVC 240 GYTSKMAGTE ILKP ATFS+CY +PFLA+HPM+YA+MLA K Q++ + WLLNTGW+ Sbjct 424 GYTSKMAGTEDNILKPTATFSSCYAAPFLALHPMIYAQMLADKYQKHKPNVWLLNTGWIY 483 Query 241 GGYGAKEGRRISLQYTRAMVDAIHDGSLAKQQFEEMPIFKLRVPTAVPGVPSELLMPQRA 300 G YG+ G RI L+YTR +VD IH+ L Q+++ PIF +P + G+P E++ P Sbjct 484 GSYGSDNGIRIPLKYTRLLVDYIHENKLNNIQYKKTPIFNFNIPEHLEGIPDEVIDPLIG 543 Query 301 WRDKKDLNRQLKKLAALFVENFVQYHDKATPEIIQA 336 W+DK+D L+ LA F+ NF Y DKA PEI+ Sbjct 544 WKDKEDYLTNLQILAKEFINNFSLYLDKAGPEILSG 579 Lambda K H 0.320 0.136 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 124299612944 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40