bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0581_orf1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0234 477 3e-133
> 5833.PF13_0234
Length=583
Score = 477 bits (1227), Expect = 3e-133, Method: Compositional matrix adjust.
Identities = 218/336 (64%), Positives = 262/336 (77%), Gaps = 0/336 (0%)
Query 1 YAGEMKKGILTLMMYLMPKQGRLPLHSSCNIGDKGDVTLFFGLSGTGKTTLSADPRRELI 60
YAGEMKKGILTL MY MPK+G+LPLHSSCNIG K DVTLFFGLSGTGKTTLSAD R LI
Sbjct 244 YAGEMKKGILTLFMYKMPKEGKLPLHSSCNIGKKNDVTLFFGLSGTGKTTLSADANRYLI 303
Query 61 GDDEHVWTSKGVFNIEGGCYAKCKDLSREQEPEIYNAIRFGAVLENVVLEEEERNVDFSD 120
GDDEHVWT G+FNIEGGCYAKCK LS+ QEPEIY AI+FGA+LENVV++ R VD+++
Sbjct 304 GDDEHVWTDDGIFNIEGGCYAKCKGLSKRQEPEIYKAIKFGAILENVVMDPVTREVDYNN 363
Query 121 STITENTRCAYPLHFIPNAKIPAAVNRHPSNIILLTCDAFGVLPPVWKLSASQVMYHFIS 180
TITENTRCAYPL +I NAKIPA ++ HP NIILLTCDAFGV+PP+ KL Q+MYHF+S
Sbjct 364 CTITENTRCAYPLSYIENAKIPAYIHTHPQNIILLTCDAFGVIPPLCKLDVYQMMYHFVS 423
Query 181 GYTSKMAGTEIGILKPAATFSACYGSPFLAMHPMVYAEMLAAKLQQYNADAWLLNTGWVC 240
GYTSKMAGTE ILKP ATFS+CY +PFLA+HPM+YA+MLA K Q++ + WLLNTGW+
Sbjct 424 GYTSKMAGTEDNILKPTATFSSCYAAPFLALHPMIYAQMLADKYQKHKPNVWLLNTGWIY 483
Query 241 GGYGAKEGRRISLQYTRAMVDAIHDGSLAKQQFEEMPIFKLRVPTAVPGVPSELLMPQRA 300
G YG+ G RI L+YTR +VD IH+ L Q+++ PIF +P + G+P E++ P
Sbjct 484 GSYGSDNGIRIPLKYTRLLVDYIHENKLNNIQYKKTPIFNFNIPEHLEGIPDEVIDPLIG 543
Query 301 WRDKKDLNRQLKKLAALFVENFVQYHDKATPEIIQA 336
W+DK+D L+ LA F+ NF Y DKA PEI+
Sbjct 544 WKDKEDYLTNLQILAKEFINNFSLYLDKAGPEILSG 579
Lambda K H
0.320 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 124299612944
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40