bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0564_orf1 Length=230 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0532 148 1e-34 > 5833.PF14_0532 Length=1617 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 73/225 (32%), Positives = 139/225 (61%), Gaps = 5/225 (2%) Query 2 GATFATIADTDGIIS-VRDAVSACSKLGLEPLHLHSRRQISSLQQMLELMEMDLTNPVPV 60 GAT+ + + II+ ++D + C+ GL P+HL+ QI +L+++ + M++++TNPVP+ Sbjct 595 GATYYIPSVDNKIINKLKDVENVCATYGLNPIHLYHESQIYTLRKVFDTMDINITNPVPL 654 Query 61 AI-NSGANVFYSLDFKKDVTEFIVDAQKNGGFISNTVGLSPTGLIFFDSSATDMSTLICS 119 AI + +YSLDF+ +V + I K G + NT G++ G+ FFDSS+++MS +CS Sbjct 655 AIRKEDSEFYYSLDFQTNVHDIIA---KFGTPVGNTFGINNIGITFFDSSSSEMSAFVCS 711 Query 120 TNEDAWNPPQVPLDITCTTSVEGNASFDGPPGSSFFVRCPEGCMHNVEAAKLVGGETGVY 179 N ++ N P+ +++ C +S++ + G+ + ++CP C+ ++GGE +Y Sbjct 712 DNINSINLPEPFVNLDCQSSLKETNEIEKMIGNEYLIKCPHDCLERDIEESVIGGEGNIY 771 Query 180 AADSAICIAAIHSGLLTRGGEASVQIVSTPSEFEGSDKNGIQSAS 224 + DS+IC++AIH+G+ + +++++ +E+ G +NGI S S Sbjct 772 SEDSSICLSAIHAGIYDKHYLIHLRVINALNEYGGFFQNGIISES 816 Lambda K H 0.315 0.131 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 64397904082 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40