bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0529_orf2
Length=204
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0643 178 8e-44
> 5833.PF14_0643
Length=442
Score = 178 bits (452), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 143/216 (66%), Gaps = 16/216 (7%)
Query 1 QRPGKFMDEFSREFEEEFMKLMRTRYCRTRVLANSVYNNVVCDRHHIHMNSTIWVTLSEF 60
Q KFMD++S FE+EFM+LM+T+YCR R+LAN+VY N++ D+ HIHMN+T+WVTL++F
Sbjct 59 QDANKFMDDYSAMFEKEFMRLMKTKYCRARILANTVYTNMISDKGHIHMNATVWVTLTDF 118
Query 61 VQYLGATQKCKIEHTPKGWYVEYIDHEELAKKEEEAKRRKIEKSQEDARMEQIQAMVEES 120
V YLG T KCKIE T +GWY+EYID E++ +++ +R+KIE S E+ + ++I ++E+
Sbjct 119 VLYLGKTGKCKIEQTERGWYLEYIDREKIEREKAYQERKKIEYSYEELKEKKINEAIQEA 178
Query 121 RRRGGFQEPEYTPLQREEGHTVALTFNKTQPES---KERKVNALQQLHEQ-LKQERLSKS 176
+++G F E EYT L+++ + ++ KT ++ K+ K N L + LKQ+ +K
Sbjct 179 KKKGTFIESEYTALEKKNDEKIIISSIKTNNDTNSIKDLKPNVNIFLDKNLLKQDSQNKK 238
Query 177 GSQAE------------KRKLSAMEALVLEAEQRKQ 200
S + KR LS ++ L+LE E++K+
Sbjct 239 KSIIDDKNINHRSNTKNKRPLSELDLLILENEEKKK 274
Lambda K H
0.314 0.127 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 50224503818
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40