bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0478_orf1 Length=258 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_1670 275 8e-73 > 5807.cgd7_1670 Length=1132 Score = 275 bits (704), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 133/259 (51%), Positives = 178/259 (68%), Gaps = 4/259 (1%) Query 1 HKVLLPLVNNPENMPRLQAVLAHSSNMQALIFASSGLMNLFTRYWGQISDKQKEETRNFL 60 H+VLLPL N + +LQA+LA SSN AL+FA++GL LFT W QI D QKEET+ FL Sbjct 13 HEVLLPLTCNLGCLTQLQALLAQSSNPHALMFAATGLSKLFTSCWAQIPDNQKEETKTFL 72 Query 61 LNYLYQRSADLLHNAQEILGHLIRLLCRIVKLSWFEDVDKK--ILEQVGLFLSASTAHWV 118 LNYLY+ D+L +A ++GH +RLL ++VK + + + I +QVG FLSAST+HW+ Sbjct 73 LNYLYKCGPDMLRSAPYLVGHYVRLLAQLVKFGLLDSLSPRPTITDQVGQFLSASTSHWI 132 Query 119 VGLYIYTELTQEMQPKIGYHMSRLRRVAFSFRDIALSSILKVAVKTLQQFDAGAIRVPND 178 +GL I+T LTQEMQ G + ++ RR A FRD +L I ++A+KTL+QF G++ V Sbjct 133 IGLIIFTTLTQEMQTSTGLYFAKYRRAAILFRDTSLPVIFQIAIKTLRQFHLGSVSVSTQ 192 Query 179 EEETRLLKQVLQLALNCLSFDFMGTIADDTTDEQNTVMIPQGWSEFREERFPKMFFSLYN 238 EE RLL+QVLQL L CLS+DFMGT+ D+T++EQNTVMIP W+ REE P +FF +Y Sbjct 193 HEEYRLLRQVLQLTLCCLSYDFMGTVPDETSEEQNTVMIPHSWTILREEYIPIIFFDIYA 252 Query 239 ACWQKNPHRPRVECARLCL 257 C N P +CA +CL Sbjct 253 KCCSPNSSMP--DCASICL 269 Lambda K H 0.324 0.136 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 80470868093 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40