bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0475_orf1 Length=299 Score E Sequences producing significant alignments: (Bits) Value 44689.DDB_0230170 172 8e-42 > 44689.DDB_0230170 Length=289 Score = 172 bits (437), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 123/300 (41%), Positives = 173/300 (57%), Gaps = 24/300 (8%) Query 7 KMGDSEAEVF-LTPDGSLYHLGVKAGEINQRILTVGDRERAEIIANAYLTDVKEYEKSRN 65 K+GD++ F + ++YHLGV GE++QRILTVGD ERA + L +V+E + R Sbjct 6 KLGDAKNANFPVDERNAVYHLGVAKGELSQRILTVGDSERASRLTKELLEEVEEEKAHRG 65 Query 66 FRTFSGVYKGVPVSVVSIGMGAPNMDFLVRESSYLFKDQPMAFVRVGTCGIFKPNVAPGA 125 F +G YKGV VS+VSIGMG P MDFLVRE ++ D PMA +R GTCG K +V G+ Sbjct 66 FVIHTGKYKGVRVSIVSIGMGTPMMDFLVREGRFVV-DGPMAIIRYGTCGSIK-DVEVGS 123 Query 126 LCLADKIYYCQRNYSYFDGNVTEGSSFSDSPYLISGPVKGDEELIEKIKSNLGK--KDDV 183 L +A+ +RN ++ + + + PY IS PV GD+ELI+ +K++ KD Sbjct 124 LAIAESSILIRRNPDFWHSDNNKDQTKC-KPYDISKPVAGDKELIDLLKNDFESIFKDRK 182 Query 184 VVLKGPAISAETFYSCQGRRFPDFSDENKSLVDTFVDL---GVIGCEMESHQLYHLCKQR 240 V+ G SA++FYS QGR P+F D N+ L++ +DL V EME+ QLYHL Sbjct 183 TVV-GINASADSFYSSQGRIDPEFDDFNEQLIENIIDLYENKVNTLEMETFQLYHL---- 237 Query 241 TDANPKKTKTRAASVCLGVVNRVDPSTPAHLTRQSEESTKQTVLAAAG-AALDALISLPL 299 A K +AAS + + NRV T A L + +TK + G A L++LI + L Sbjct 238 --ATRSKQPIKAASSTIILANRV---TQAFL----DNNTKVKLEIEGGRACLESLIKVNL 288 Lambda K H 0.318 0.135 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 103213341868 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40