bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0473_orf1 Length=123 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0021 87.8 8e-17 > 5833.PF13_0021 Length=211 Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 2/91 (2%) Query 13 SCIPRIDLKDAGDKLVLHADIPGIDKKDVKVEAHDGRLVIQAASNKSEEHKDS--NWYMQ 70 S +P +D+ D L + D+PG++K+DV++ DG+L I KS E KD +Y++ Sbjct 101 SNVPAMDVLDKEKHLEIKMDVPGLNKEDVQINLDDGKLEISGEFKKSHEQKDEQQRYYIK 160 Query 71 ERCSSNFYRSFQLPANIQEEAIKATYNNGVL 101 ERC S+FYRSF LP N+ E+ IKAT+ +GVL Sbjct 161 ERCESSFYRSFTLPENVSEDEIKATFKDGVL 191 Lambda K H 0.313 0.129 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22834639773 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40